NVIDIA Clara Parabricks Pipelines: Software Overview

Parabricks is a software suite for genomic analysis. It delivers major improvements in throughput time for common analytical tasks in genomics, including germline and somatic analysis. The core of the Parabricks software is its data pipeline which takes raw data and transoforms it according to the user's requirements.

The Parabricks software supports the pipeline shown below:

The Parabricks software can be configured to run specific accelerated tools or run full pipelines that are commonly used. The standalone tools page covers individual tools and the pipelines page discuss how to run commonly used pipelines.

NVIDIA Parabricks’ pipelines have been tested on Dell, HPE, IBM, and NVIDIA servers at Amazon Web Services, Google Cloud, Oracle Cloud Infrastructure, and Microsoft Azure.